Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hth-type transcriptional regulator yncc | SAMEA3710568_04702 | Not Available | Negative | 4526498 - 4527163 | 25105.9 |
| oxidoreductase | SAMEA3710568_04703 | Not Available | Negative | 4527361 - 4528398 | 37652.0 |
| putative reverse transcriptase | SAMEA3710568_04705 | Not Available | Positive | 4529716 - 4529859 | 5309.22 |
| uncharacterised protein | SAMEA3710568_04706 | Not Available | Positive | 4529859 - 4530011 | 6002.39 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_04708 | Not Available | Positive | 4530238 - 4530504 | 10203.3 |
| acetyltransferase, gnat family | SAMEA3710568_04709 | Not Available | Positive | 4530492 - 4530977 | 17815.7 |
| uncharacterised protein | SAMEA3710568_04710 | Not Available | Positive | 4531604 - 4531840 | 9260.69 |
| uncharacterised protein | SAMEA3710568_04711 | Not Available | Positive | 4532000 - 4532140 | 5424.01 |
| ospc3, probably secreted by the mxi-spa machinery | SAMEA3710568_04712 | Not Available | Negative | 4532470 - 4532586 | 4268.15 |
| transposase and inactivated derivatives | SAMEA3710568_04713 | Not Available | Negative | 4532932 - 4533426 | 18176.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





