Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| issfl3 orfa | SAMEA3710568_04594 | Not Available | Negative | 4440648 - 4441298 | 24926.8 |
| is911 orf1 | SAMEA3710568_04595 | Not Available | Negative | 4441494 - 4441613 | 4366.28 |
| putative integrase | SAMEA3710568_04596 | Not Available | Negative | 4442435 - 4444039 | 60531.1 |
| Trna-gly | Not Available | Not Available | Positive | 4444154 - 4444228 | Not Available |
| Trna-thr | Not Available | Not Available | Positive | 4444232 - 4444307 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 4444310 - 4444386 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 4444388 - 4444464 | Not Available |
| putative bacteriophage protein | SAMEA3710568_04601 | Not Available | Negative | 4444673 - 4445320 | 24959.1 |
| phage integrase | SAMEA3710568_04602 | Not Available | Positive | 4445607 - 4446770 | 44901.0 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_04603 | Not Available | Positive | 4447125 - 4448291 | 43923.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





