Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator yidz | SAMEA3710568_04480 | Not Available | Negative | 4350152 - 4350847 | 26739.5 |
| multidrug efflux system protein mdtl | SAMEA3710568_04481 | Not Available | Negative | 4350822 - 4351997 | 41556.3 |
| tryptophan permease tnab | SAMEA3710568_04482 | Not Available | Negative | 4352129 - 4353376 | 45241.3 |
| tryptophanase | SAMEA3710568_04483 | Not Available | Negative | 4353467 - 4354882 | 52776.4 |
| putative secretion protein | SAMEA3710568_04484 | Not Available | Negative | 4355695 - 4356342 | 24081.9 |
| arac family transcriptional regulator | SAMEA3710568_04485 | Not Available | Positive | 4356439 - 4357254 | 30528.3 |
| o-6-alkylguanine-dna:cysteine-protein methyltransferase | SAMEA3710568_04487 | Not Available | Positive | 4357798 - 4358313 | 19180.2 |
| fumarate/nitrate reduction transcriptional regulator | SAMEA3710568_04488 | Not Available | Positive | 4358508 - 4359260 | 27968.9 |
| universal stress protein uspe | SAMEA3710568_04489 | Not Available | Positive | 4359412 - 4360362 | 35708.9 |
| protein of uncharacterised function (duf2534) | SAMEA3710568_04490 | Not Available | Negative | 4360502 - 4360669 | 6021.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





