Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | SAMEA3710568_04410 | Not Available | Negative | 4287809 - 4287988 | 7017.05 |
| bacteriophage protein | SAMEA3710568_04411 | Not Available | Negative | 4288201 - 4288623 | 15963.3 |
| integrase for prophage cp-933u | SAMEA3710568_04412 | Not Available | Positive | 4288964 - 4289809 | 32188.6 |
| Trna-ser | Not Available | Not Available | Positive | 4289862 - 4289951 | Not Available |
| putative yeei protein | SAMEA3710568_04414 | Not Available | Positive | 4290045 - 4290842 | 30239.7 |
| Trna-asn | Not Available | Not Available | Positive | 4290943 - 4291018 | Not Available |
| putative integrase | SAMEA3710568_04416 | Not Available | Positive | 4291693 - 4292442 | 28655.8 |
| is91 orf | SAMEA3710568_04417 | Not Available | Positive | 4292846 - 4292992 | 5699.2 |
| is3 orf2, fragment | SAMEA3710568_04418 | Not Available | Positive | 4293494 - 4293613 | 4404.34 |
| uncharacterised protein | SAMEA3710568_04419 | Not Available | Positive | 4293837 - 4294415 | 21908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





