Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor-type transcriptional regulator | SAMEA3710568_04399 | Not Available | Negative | 4278707 - 4279474 | 27321.2 |
| dehydrogenase | SAMEA3710568_04400 | Not Available | Positive | 4279670 - 4279897 | 7420.92 |
| nad binding domain of 6-phosphogluconate dehydrogenase | SAMEA3710568_04401 | Not Available | Positive | 4279907 - 4280578 | 22900.6 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_04402 | Not Available | Positive | 4280575 - 4280808 | 8120.85 |
| protein disaggregation chaperone | SAMEA3710568_04403 | Not Available | Negative | 4281101 - 4283674 | 95620.9 |
| laccase domain protein yfih | SAMEA3710568_04404 | Not Available | Negative | 4283804 - 4284535 | 26381.5 |
| 23s rrna pseudouridine synthase d | SAMEA3710568_04405 | Not Available | Negative | 4284532 - 4285512 | 37109.8 |
| outer membrane protein assembly complex subunit yfio | SAMEA3710568_04406 | Not Available | Positive | 4285647 - 4286384 | 27786.9 |
| is4 orf | SAMEA3710568_04407 | Not Available | Negative | 4286660 - 4286794 | 5278.66 |
| uncharacterised protein | SAMEA3710568_04408 | Not Available | Positive | 4286873 - 4287352 | 17483.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





