Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein ydcz | SAMEA3710568_04340 | Not Available | Negative | 4230134 - 4230583 | 15796.0 |
| acetyltransferase, gnat family | SAMEA3710568_04341 | Not Available | Negative | 4230580 - 4231098 | 19230.7 |
| lipoprotein | SAMEA3710568_04342 | Not Available | Positive | 4231497 - 4231871 | 13279.3 |
| agmatinase | SAMEA3710568_04343 | Not Available | Positive | 4232007 - 4232927 | 33558.9 |
| peptidase, m48b family | SAMEA3710568_04344 | Not Available | Negative | 4233133 - 4233891 | 26807.8 |
| transketolase | SAMEA3710568_04345 | Not Available | Positive | 4234169 - 4236160 | 72157.6 |
| putative serine protease | SAMEA3710568_04346 | Not Available | Negative | 4236206 - 4237114 | 33051.9 |
| cryptic phospho-beta-glucosidase | SAMEA3710568_04347 | Not Available | Positive | 4238185 - 4239030 | 31411.6 |
| cryptic phospho-beta-glucosidase | SAMEA3710568_04348 | Not Available | Positive | 4239088 - 4239537 | 16605.8 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_04349 | Not Available | Positive | 4239550 - 4240308 | 27957.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





