Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialic acid transporter | SAMEA3710568_04330 | Not Available | Positive | 4220660 - 4222150 | 53584.4 |
| n-acetylmannosamine-6-phosphate 2-epimerase | SAMEA3710568_04331 | Not Available | Positive | 4222198 - 4222887 | 24089.1 |
| nagc-like transcriptional regulator | SAMEA3710568_04332 | Not Available | Positive | 4222884 - 4223759 | 29699.8 |
| putative beta-galactosidase, beta subunit | SAMEA3710568_04333 | Not Available | Positive | 4223756 - 4224220 | 17052.7 |
| inner membrane abc transporter permease protein ydcu | SAMEA3710568_04334 | Not Available | Positive | 4225320 - 4225700 | 13457.8 |
| putative transport system permease | SAMEA3710568_04335 | Not Available | Positive | 4225690 - 4226484 | 28723.5 |
| gamma-aminobutyraldehyde dehydrogenase | SAMEA3710568_04336 | Not Available | Positive | 4226506 - 4227930 | 50905.9 |
| putative acetyltransferase | SAMEA3710568_04337 | Not Available | Positive | 4228140 - 4228949 | 31073.3 |
| protein of uncharacterised function (duf2566) | SAMEA3710568_04338 | Not Available | Positive | 4229641 - 4229814 | 6706.54 |
| protein of uncharacterised function (duf2526) | SAMEA3710568_04339 | Not Available | Positive | 4229900 - 4230133 | 8800.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





