Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain/diguanylate cyclase (ggdef) domain protein | SAMEA3710568_04288 | Not Available | Positive | 4180214 - 4181239 | 38528.8 |
| putative transposase | SAMEA3710568_04289 | Not Available | Negative | 4181764 - 4181985 | 8267.08 |
| zinc/cadmium-binding protein | SAMEA3710568_04290 | Not Available | Negative | 4183504 - 4184154 | 24812.2 |
| putative sulfite oxidase subunit yedz | SAMEA3710568_04291 | Not Available | Negative | 4184412 - 4185047 | 24010.6 |
| putative sulfite oxidase subunit yedy | SAMEA3710568_04292 | Not Available | Negative | 4185048 - 4185695 | 24462.6 |
| putative sulfite oxidase subunit yedy | SAMEA3710568_04293 | Not Available | Negative | 4185837 - 4186052 | 7782.49 |
| transthyretin family protein | SAMEA3710568_04294 | Not Available | Negative | 4186161 - 4186574 | 15509.5 |
| transcriptional regulator yedw | SAMEA3710568_04295 | Not Available | Positive | 4186596 - 4187378 | 29472.5 |
| heavy metal sensor histidine kinase | SAMEA3710568_04296 | Not Available | Positive | 4187378 - 4188736 | 50818.7 |
| chaperone protein hcha | SAMEA3710568_04297 | Not Available | Negative | 4188844 - 4189695 | 31281.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





