Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isec17, transposase orfb | SAMEA3710568_04267 | Not Available | Positive | 4157707 - 4158291 | 22415.7 |
| iso-is1 orf1 | SAMEA3710568_04268 | Not Available | Positive | 4158630 - 4158902 | 10266.4 |
| putative transposase | SAMEA3710568_04269 | Not Available | Positive | 4159304 - 4159684 | 14310.2 |
| is1414, transposase | SAMEA3710568_04270 | Not Available | Positive | 4159747 - 4159965 | 8455.38 |
| serine protease pic precursor | SAMEA3710568_04271 | Not Available | Negative | 4160116 - 4164234 | 146461.0 |
| is629 orf2 | SAMEA3710568_04272 | Not Available | Negative | 4164399 - 4164785 | 14441.0 |
| reverse transcriptase-like protein | SAMEA3710568_04274 | Not Available | Negative | 4164962 - 4166485 | 58635.5 |
| peptidase | SAMEA3710568_04275 | Not Available | Negative | 4167209 - 4167487 | 10568.1 |
| tonb-dependent receptor | SAMEA3710568_04276 | Not Available | Negative | 4167697 - 4169904 | 83035.1 |
| inner membrane abc transporter atp-binding protein | SAMEA3710568_04277 | Not Available | Negative | 4169942 - 4170523 | 21658.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





