Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exonuclease i | SAMEA3710568_04256 | Not Available | Negative | 4148534 - 4149958 | 54363.4 |
| phage integrase family protein | SAMEA3710568_04257 | Not Available | Positive | 4150140 - 4150979 | 32460.1 |
| is orf, fragment | SAMEA3710568_04258 | Not Available | Positive | 4151318 - 4151623 | 11074.6 |
| is66 family element, orf2 protein | SAMEA3710568_04259 | Not Available | Positive | 4151623 - 4151970 | 13146.1 |
| issfl4 orf3 | SAMEA3710568_04260 | Not Available | Positive | 4151990 - 4153297 | 48604.4 |
| putative transposase, fragment | SAMEA3710568_04261 | Not Available | Positive | 4153971 - 4154105 | 5170.4 |
| ospd1 | SAMEA3710568_04262 | Not Available | Positive | 4154859 - 4155536 | 24809.5 |
| uncharacterised protein | SAMEA3710568_04263 | Not Available | Negative | 4155600 - 4155830 | 8761.18 |
| uncharacterised protein | SAMEA3710568_04264 | Not Available | Negative | 4156018 - 4156242 | 8241.82 |
| ipgb2 | SAMEA3710568_04265 | Not Available | Positive | 4156644 - 4157210 | 21530.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





