Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl carboxypeptidase ii | SAMEA3710568_04245 | Not Available | Negative | 4136271 - 4138316 | 77506.8 |
| 3-hydroxy acid dehydrogenase | SAMEA3710568_04246 | Not Available | Positive | 4138453 - 4139199 | 27207.4 |
| gntr family transcriptional regulator | SAMEA3710568_04247 | Not Available | Positive | 4139288 - 4139974 | 26566.7 |
| putative selenoprotein ydfz | SAMEA3710568_04248 | Not Available | Positive | 4140152 - 4140355 | 7276.83 |
| mannitol dehydrogenase family protein | SAMEA3710568_04249 | Not Available | Negative | 4140391 - 4141851 | 53669.3 |
| inner membrane metabolite transport protein ydfj | SAMEA3710568_04250 | Not Available | Negative | 4141940 - 4142944 | 36276.2 |
| nad dependent epimerase/dehydratase family protein | SAMEA3710568_04251 | Not Available | Positive | 4143589 - 4144413 | 29680.7 |
| amino acid/amine transport protein | SAMEA3710568_04253 | Not Available | Positive | 4145655 - 4147013 | 49492.5 |
| putative transport system permease | SAMEA3710568_04254 | Not Available | Positive | 4147246 - 4148250 | 36246.2 |
| sira family protein | SAMEA3710568_04255 | Not Available | Positive | 4148264 - 4148491 | 8092.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





