Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| drug resistance mfs transporter, drug:h+ antiporter-1 (dha2) family | SAMEA3710568_04235 | Not Available | Positive | 4128427 - 4129854 | 51540.0 |
| transcriptional repressor rbsr | SAMEA3710568_04236 | Not Available | Negative | 4129820 - 4130812 | 36614.1 |
| putative sugar kinase, ribokinase family | SAMEA3710568_04237 | Not Available | Negative | 4130816 - 4131745 | 32308.4 |
| putative sugar abc transporter periplasmic sugar-binding protein | SAMEA3710568_04238 | Not Available | Negative | 4131871 - 4132395 | 18122.8 |
| d-ribose-binding periplasmic protein precursor | SAMEA3710568_04239 | Not Available | Negative | 4132447 - 4132761 | 10917.2 |
| ribose abc transporter permease | SAMEA3710568_04240 | Not Available | Negative | 4132786 - 4133751 | 33496.1 |
| ribose import atp-binding protein rbsa | SAMEA3710568_04241 | Not Available | Negative | 4133756 - 4134013 | 9426.49 |
| ribose abc transporter, atp-binding protein | SAMEA3710568_04242 | Not Available | Negative | 4134010 - 4134909 | 33124.2 |
| uncharacterized conserved protein | SAMEA3710568_04243 | Not Available | Negative | 4135199 - 4135432 | 8298.95 |
| competence damage-inducible protein a | SAMEA3710568_04244 | Not Available | Positive | 4135708 - 4136226 | 18265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





