Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructosamine kinase | SAMEA3710568_04196 | Not Available | Negative | 4088435 - 4089295 | 32428.3 |
| protein of uncharacterised function (duf2622) | SAMEA3710568_04197 | Not Available | Negative | 4089401 - 4089691 | 10846.6 |
| 6-phosphofructokinase | SAMEA3710568_04198 | Not Available | Negative | 4089792 - 4090721 | 32457.9 |
| putative salt-induced outer membrane protein | SAMEA3710568_04199 | Not Available | Positive | 4091008 - 4091766 | 27599.6 |
| transmembrane anchor protein | SAMEA3710568_04200 | Not Available | Negative | 4091819 - 4091926 | 4115.44 |
| ankyrin repeat protein b | SAMEA3710568_04201 | Not Available | Negative | 4092098 - 4092490 | 14462.5 |
| ankyrin repeat protein b | SAMEA3710568_04202 | Not Available | Negative | 4092516 - 4092917 | 15051.5 |
| outer membrane protein icsa | SAMEA3710568_04220 | Not Available | Negative | 4111062 - 4114370 | 116251.0 |
| vira | SAMEA3710568_04221 | Not Available | Positive | 4114899 - 4116101 | 44737.0 |
| is629 orf1 | SAMEA3710568_04222 | Not Available | Positive | 4116280 - 4116498 | 8042.64 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





