Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase subunit xdha | SAMEA3710568_04186 | Not Available | Negative | 4077928 - 4080225 | 82633.0 |
| lipoprotein | SAMEA3710568_04187 | Not Available | Positive | 4080640 - 4081395 | 26574.0 |
| Trna-gly | Not Available | Not Available | Positive | 4081474 - 4081547 | Not Available |
| putative integrase | SAMEA3710568_04189 | Not Available | Positive | 4081682 - 4083298 | 60616.3 |
| uncharacterised protein | SAMEA3710568_04190 | Not Available | Positive | 4083282 - 4083938 | 24584.3 |
| sodium:dicarboxylate symporter family | SAMEA3710568_04191 | Not Available | Negative | 4084767 - 4085090 | 10854.4 |
| sodium:dicarboxylate symporter family | SAMEA3710568_04192 | Not Available | Negative | 4085090 - 4086157 | 37878.4 |
| inner membrane protein ydjm precursor | SAMEA3710568_04193 | Not Available | Negative | 4086290 - 4086880 | 22351.7 |
| 2-deoxyglucose-6-phosphatase | SAMEA3710568_04194 | Not Available | Negative | 4087043 - 4087711 | 24330.7 |
| putative inner membrane protein | SAMEA3710568_04195 | Not Available | Positive | 4087858 - 4088394 | 20338.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





