Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative uroporphyrinogen iii c-methyltransferase | SAMEA3710568_04173 | Not Available | Positive | 4063580 - 4064809 | 44312.9 |
| putative protoheme ix biogenesis protein | SAMEA3710568_04174 | Not Available | Positive | 4064812 - 4066008 | 45247.7 |
| lipid a biosynthesis (kdo)2-(lauroyl)-lipid iva acyltransferase | SAMEA3710568_04177 | Not Available | Negative | 4067222 - 4068166 | 36585.8 |
| virk protein | SAMEA3710568_04178 | Not Available | Negative | 4068231 - 4068749 | 19751.9 |
| putative glycosyl transferase, group 1 family protein | SAMEA3710568_04179 | Not Available | Negative | 4069186 - 4070274 | 40580.5 |
| carbohydrate transport protein | SAMEA3710568_04180 | Not Available | Negative | 4070277 - 4071098 | 32210.5 |
| putative recombination protein recb | SAMEA3710568_04181 | Not Available | Positive | 4071665 - 4074514 | 108522.0 |
| is629 orf2 | SAMEA3710568_04182 | Not Available | Negative | 4075192 - 4075485 | 11019.9 |
| xanthine dehydrogenase subunit xdhc | SAMEA3710568_04184 | Not Available | Negative | 4076563 - 4077042 | 16940.7 |
| xanthine dehydrogenase subunit xdhb | SAMEA3710568_04185 | Not Available | Negative | 4077039 - 4077917 | 31618.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





