Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate epimerase | SAMEA3710568_04163 | Not Available | Positive | 4051873 - 4052697 | 30254.4 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_04164 | Not Available | Positive | 4052694 - 4053401 | 26730.4 |
| site-specific tyrosine recombinase xerc | SAMEA3710568_04165 | Not Available | Positive | 4053398 - 4054294 | 33811.6 |
| flavin mononucleotide phosphatase | SAMEA3710568_04166 | Not Available | Positive | 4054294 - 4055010 | 27123.4 |
| dna-dependent helicase ii | SAMEA3710568_04167 | Not Available | Positive | 4055094 - 4057256 | 82024.8 |
| predicted periplasmic protein (duf2233) | SAMEA3710568_04168 | Not Available | Negative | 4057403 - 4057834 | 15729.3 |
| frataxin-like protein | SAMEA3710568_04169 | Not Available | Positive | 4058587 - 4058907 | 12202.0 |
| adenylate cyclase | SAMEA3710568_04170 | Not Available | Negative | 4058947 - 4061493 | 97589.3 |
| porphobilinogen deaminase | SAMEA3710568_04171 | Not Available | Positive | 4061859 - 4062821 | 34592.9 |
| uroporphyrinogen-iii synthase | SAMEA3710568_04172 | Not Available | Positive | 4062818 - 4063558 | 27829.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





