Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cryptic curlin major subunit | SAMEA3710568_04143 | Not Available | Negative | 4038922 - 4039287 | 12406.8 |
| uncharacterised protein | SAMEA3710568_04144 | Not Available | Positive | 4039825 - 4040025 | 7999.58 |
| long polar fimbrial operon protein lpfa | SAMEA3710568_04145 | Not Available | Negative | 4040466 - 4041038 | 19641.0 |
| is4 orf | SAMEA3710568_04146 | Not Available | Negative | 4041330 - 4042658 | 50287.7 |
| putative abc transporter solute-binding protein | SAMEA3710568_04147 | Not Available | Positive | 4042843 - 4043112 | 9532.36 |
| putative abc transporter solute-binding protein | SAMEA3710568_04148 | Not Available | Positive | 4043182 - 4043595 | 14893.8 |
| abc transporter permease | SAMEA3710568_04149 | Not Available | Positive | 4043568 - 4043990 | 15334.4 |
| transport system permease | SAMEA3710568_04150 | Not Available | Positive | 4044094 - 4044438 | 12309.9 |
| abc transporter permease | SAMEA3710568_04151 | Not Available | Positive | 4044386 - 4045039 | 24208.7 |
| abc transporter atp-binding protein | SAMEA3710568_04152 | Not Available | Positive | 4045039 - 4045692 | 23950.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





