Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid-resistance protein | SAMEA3710568_04110 | Not Available | Negative | 4006404 - 4006742 | 12523.1 |
| acid-resistance protein | SAMEA3710568_04111 | Not Available | Negative | 4006846 - 4007178 | 11858.2 |
| acid-resistance membrane protein | SAMEA3710568_04112 | Not Available | Positive | 4007433 - 4008005 | 20904.6 |
| transcriptional regulator gade | SAMEA3710568_04113 | Not Available | Positive | 4008804 - 4009331 | 20600.6 |
| uncharacterised protein | SAMEA3710568_04114 | Not Available | Negative | 4009332 - 4009610 | 9789.75 |
| multidrug resistance protein mdte precursor | SAMEA3710568_04115 | Not Available | Positive | 4009670 - 4010587 | 32797.1 |
| glutamate racemase | SAMEA3710568_04116 | Not Available | Negative | 4011223 - 4012080 | 31075.8 |
| vitamin b12 transporter btub precursor | SAMEA3710568_04117 | Not Available | Negative | 4012025 - 4013869 | 68439.8 |
| trna (uracil-5-)-methyltransferase | SAMEA3710568_04119 | Not Available | Positive | 4014238 - 4015338 | 41955.3 |
| inner membrane protein yijd | SAMEA3710568_04120 | Not Available | Negative | 4015378 - 4015737 | 13014.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





