Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine recombinase | SAMEA3710568_04057 | Not Available | Positive | 3958303 - 3958899 | 23117.6 |
| major type 1 subunit fimbrin | SAMEA3710568_04058 | Not Available | Positive | 3959380 - 3959928 | 18346.5 |
| type-1 fimbrial-like protein | SAMEA3710568_04059 | Not Available | Positive | 3960035 - 3960532 | 17664.0 |
| periplasmic chaperone | SAMEA3710568_04060 | Not Available | Positive | 3960569 - 3961294 | 26702.7 |
| outer membrane usher protein fimd | SAMEA3710568_04061 | Not Available | Positive | 3961361 - 3961978 | 22684.2 |
| reverse transcriptase | SAMEA3710568_04063 | Not Available | Positive | 3962858 - 3964036 | 46259.1 |
| transposase and inactivated derivatives | SAMEA3710568_04065 | Not Available | Negative | 3964325 - 3964810 | 18327.3 |
| plasmid partition par b protein | SAMEA3710568_04066 | Not Available | Negative | 3965066 - 3966046 | 36857.4 |
| plasmid segregation protein | SAMEA3710568_04067 | Not Available | Negative | 3966046 - 3967245 | 44390.2 |
| iso-is1 orf2 | SAMEA3710568_04068 | Not Available | Negative | 3967567 - 3967956 | 15433.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





