Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase subunit c | SAMEA3710568_04047 | Not Available | Negative | 3947246 - 3947641 | 15059.9 |
| fumarate reductase iron-sulfur subunit | SAMEA3710568_04048 | Not Available | Negative | 3947652 - 3948386 | 27124.5 |
| fumarate reductase flavoprotein subunit | SAMEA3710568_04049 | Not Available | Negative | 3948379 - 3950187 | 65973.4 |
| lysyl-trna synthetase | SAMEA3710568_04050 | Not Available | Positive | 3950512 - 3951489 | 36978.1 |
| inner membrane transporter yjem | SAMEA3710568_04051 | Not Available | Positive | 3951708 - 3951896 | 7027.99 |
| is1 orfb | SAMEA3710568_04052 | Not Available | Positive | 3952120 - 3952413 | 11456.1 |
| yjhs | SAMEA3710568_04053 | Not Available | Negative | 3952882 - 3953862 | 36897.9 |
| n-acetylneuraminic acid mutarotase | SAMEA3710568_04054 | Not Available | Negative | 3953927 - 3955033 | 39648.4 |
| putative n-acetylneuraminic acid outer membrane channel protein nanc precursor | SAMEA3710568_04055 | Not Available | Negative | 3955053 - 3955769 | 27889.4 |
| tyrosine recombinase | SAMEA3710568_04056 | Not Available | Positive | 3957223 - 3957708 | 18409.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





