Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferric aerobactin receptor iuta | SAMEA3710568_03974 | Not Available | Positive | 3876875 - 3879073 | 81092.3 |
| integrase fragment | SAMEA3710568_03975 | Not Available | Positive | 3879948 - 3880718 | 28500.2 |
| putative pectinesterase | SAMEA3710568_03976 | Not Available | Positive | 3880853 - 3882136 | 46067.7 |
| aconitase family protein | SAMEA3710568_03977 | Not Available | Negative | 3882277 - 3884457 | 78431.6 |
| putative inner membrane protein | SAMEA3710568_03978 | Not Available | Negative | 3884640 - 3886073 | 51340.9 |
| 3-methylitaconate isomerase | SAMEA3710568_03979 | Not Available | Negative | 3886149 - 3887201 | 37061.7 |
| lysr family transcriptional regulator | SAMEA3710568_03980 | Not Available | Positive | 3887385 - 3887927 | 20594.3 |
| lysr family transcriptional regulator | SAMEA3710568_03981 | Not Available | Positive | 3887961 - 3888338 | 14070.2 |
| 6-phosphogluconolactonase | SAMEA3710568_03982 | Not Available | Negative | 3888379 - 3889374 | 36363.7 |
| site-specific recombinase | SAMEA3710568_03983 | Not Available | Negative | 3889634 - 3889765 | 4757.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





