Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of uncharacterised function (duf3296) | SAMEA3710568_03964 | Not Available | Positive | 3866783 - 3867352 | 21821.2 |
| protein of uncharacterised function (duf3279) | SAMEA3710568_03965 | Not Available | Positive | 3867612 - 3868013 | 15540.2 |
| protein of uncharacterised function (duf3279) | SAMEA3710568_03966 | Not Available | Positive | 3868001 - 3868435 | 16525.8 |
| uncharacterised protein | SAMEA3710568_03967 | Not Available | Positive | 3868435 - 3868671 | 8306.38 |
| is600 orf2 | SAMEA3710568_03968 | Not Available | Positive | 3869114 - 3869845 | 28303.7 |
| shif protein | SAMEA3710568_03969 | Not Available | Negative | 3869795 - 3870988 | 41313.3 |
| putative siderophore synthetase component | SAMEA3710568_03970 | Not Available | Positive | 3871124 - 3872848 | 65021.6 |
| n(6)-hydroxylysine o-acetyltransferase, aerobactin biosynthetic | SAMEA3710568_03971 | Not Available | Positive | 3872849 - 3873796 | 37234.2 |
| aerobactin synthase subunit iucc | SAMEA3710568_03972 | Not Available | Positive | 3873796 - 3875538 | 66694.4 |
| l-lysine 6-monooxygenase | SAMEA3710568_03973 | Not Available | Positive | 3875535 - 3876872 | 50866.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





