Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative exported protein erfk | SAMEA3710568_03933 | Not Available | Positive | 3838336 - 3839271 | 34487.4 |
| Trna-asn | Not Available | Not Available | Positive | 3839327 - 3839402 | Not Available |
| nitrogen assimilation transcriptional regulator | SAMEA3710568_03935 | Not Available | Positive | 3839730 - 3840647 | 32864.1 |
| transcriptional regulator cbl | SAMEA3710568_03936 | Not Available | Positive | 3840749 - 3841699 | 35843.9 |
| Trna-asn | Not Available | Not Available | Positive | 3841737 - 3841812 | Not Available |
| mate family multidrug exporter | SAMEA3710568_03938 | Not Available | Positive | 3842123 - 3842647 | 18491.1 |
| mate family multidrug exporter | SAMEA3710568_03939 | Not Available | Positive | 3842638 - 3843135 | 17582.0 |
| mate family multidrug exporter | SAMEA3710568_03940 | Not Available | Positive | 3843151 - 3843444 | 11267.0 |
| Trna-asn | Not Available | Not Available | Positive | 3843545 - 3843620 | Not Available |
| protein yeen | SAMEA3710568_03942 | Not Available | Negative | 3844076 - 3844792 | 25838.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





