Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructuronate reductase | SAMEA3710568_03923 | Not Available | Negative | 3826970 - 3828430 | 53638.3 |
| mannonate dehydratase | SAMEA3710568_03924 | Not Available | Negative | 3828511 - 3829695 | 44825.6 |
| putative h+/gluconate symporter-like permease | SAMEA3710568_03925 | Not Available | Positive | 3830035 - 3831378 | 47155.0 |
| protein fimh | SAMEA3710568_03926 | Not Available | Negative | 3831629 - 3832531 | 31447.1 |
| fimbrial morphology protein | SAMEA3710568_03927 | Not Available | Negative | 3832551 - 3833054 | 17336.3 |
| fimbrial protein fimf | SAMEA3710568_03928 | Not Available | Negative | 3833067 - 3833597 | 18747.5 |
| outer membrane usher protein fimd | SAMEA3710568_03929 | Not Available | Negative | 3833607 - 3835346 | 63339.8 |
| adenosylcobinamide kinase | SAMEA3710568_03930 | Not Available | Positive | 3835934 - 3836443 | 18908.6 |
| cobalamin synthase | SAMEA3710568_03931 | Not Available | Positive | 3836440 - 3837183 | 26457.4 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | SAMEA3710568_03932 | Not Available | Positive | 3837195 - 3838274 | 36882.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





