Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid outer membrane transporter | SAMEA3710568_03903 | Not Available | Negative | 3806273 - 3807613 | 48527.1 |
| protein of uncharacterised function (duf406) | SAMEA3710568_03904 | Not Available | Positive | 3807985 - 3808269 | 10320.1 |
| 3-ketoacyl-coa thiolase | SAMEA3710568_03905 | Not Available | Positive | 3808449 - 3809759 | 46612.4 |
| multifunctional fatty acid oxidation complex subunit alpha | SAMEA3710568_03906 | Not Available | Positive | 3809759 - 3811903 | 77028.8 |
| phosphohistidine phosphatase | SAMEA3710568_03907 | Not Available | Positive | 3812106 - 3812591 | 17224.8 |
| aminoimidazole riboside kinase | SAMEA3710568_03908 | Not Available | Negative | 3813196 - 3813354 | 6191.32 |
| uncharacterised protein | SAMEA3710568_03909 | Not Available | Positive | 3813445 - 3813795 | 13262.0 |
| inner membrane protein yecn | SAMEA3710568_03910 | Not Available | Positive | 3813848 - 3814243 | 15174.2 |
| putative methyltransferase | SAMEA3710568_03911 | Not Available | Positive | 3814284 - 3815027 | 27792.3 |
| putative methyltransferase | SAMEA3710568_03912 | Not Available | Positive | 3815024 - 3815995 | 37158.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





