Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase/phosphodiesterase with pas/pac and gaf sensor | SAMEA3710568_03893 | Not Available | Negative | 3794522 - 3794962 | 16456.2 |
| diguanylate cyclase | SAMEA3710568_03894 | Not Available | Negative | 3795064 - 3796209 | 43999.2 |
| putative lipoprotein | SAMEA3710568_03895 | Not Available | Negative | 3796586 - 3797740 | 43759.7 |
| glutamate:gamma aminobutyrate antiporter | SAMEA3710568_03896 | Not Available | Negative | 3798036 - 3799571 | 55080.0 |
| glutamate decarboxylase gadb | SAMEA3710568_03897 | Not Available | Negative | 3799727 - 3801127 | 52671.0 |
| putative prophage integrase | SAMEA3710568_03898 | Not Available | Negative | 3801882 - 3802376 | 18814.8 |
| Trna-arg | Not Available | Not Available | Positive | 3802538 - 3802612 | Not Available |
| transport | SAMEA3710568_03900 | Not Available | Negative | 3802686 - 3803507 | 30089.2 |
| lipoprotein, vacj family | SAMEA3710568_03901 | Not Available | Positive | 3803912 - 3804667 | 28023.2 |
| transposase | SAMEA3710568_03902 | Not Available | Negative | 3804849 - 3805907 | 40351.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





