Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is2 orf2 | SAMEA3710568_03883 | Not Available | Positive | 3786281 - 3786739 | 17444.2 |
| is2 orf2 | SAMEA3710568_03884 | Not Available | Positive | 3786693 - 3787184 | 18569.9 |
| outer membrane protein | SAMEA3710568_03885 | Not Available | Negative | 3787109 - 3788920 | 68360.7 |
| putative chaperone | SAMEA3710568_03886 | Not Available | Negative | 3788949 - 3789644 | 25693.9 |
| fimbrial protein | SAMEA3710568_03887 | Not Available | Negative | 3789724 - 3790071 | 12309.2 |
| peroxiredoxin osmc | SAMEA3710568_03888 | Not Available | Positive | 3790645 - 3791076 | 15089.0 |
| putative abc transport system atp-binding protein | SAMEA3710568_03889 | Not Available | Negative | 3791288 - 3792058 | 28515.6 |
| abc transporter atp-binding protein | SAMEA3710568_03890 | Not Available | Negative | 3792051 - 3793025 | 35497.3 |
| atp-dependent peptide transporter membrane subunit | SAMEA3710568_03891 | Not Available | Negative | 3793022 - 3793918 | 32001.9 |
| peptidase m15d, vanx d-ala-d-ala dipeptidase | SAMEA3710568_03892 | Not Available | Negative | 3793863 - 3794264 | 14660.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





