Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-met | Not Available | Not Available | Positive | 3778205 - 3778280 | Not Available |
| deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase | SAMEA3710568_03874 | Not Available | Negative | 3778828 - 3778974 | 5506.38 |
| autoinducer 2-binding protein lsrb precursor | SAMEA3710568_03875 | Not Available | Negative | 3779001 - 3779708 | 25830.7 |
| autoinducer 2-binding protein lsrb precursor | SAMEA3710568_03876 | Not Available | Negative | 3779737 - 3780024 | 10048.2 |
| putative ribose/xylose/arabinose/galactoside abc-type transport systems, permease components | SAMEA3710568_03877 | Not Available | Negative | 3780036 - 3781028 | 34458.6 |
| inner membrane abc transporter permease protein ydey | SAMEA3710568_03878 | Not Available | Negative | 3781028 - 3782056 | 36399.1 |
| atpase | SAMEA3710568_03879 | Not Available | Negative | 3782050 - 3783585 | 55734.6 |
| putative sorc family transcriptional regulator | SAMEA3710568_03880 | Not Available | Positive | 3783834 - 3784787 | 33800.0 |
| carbohydrate kinase, fggy | SAMEA3710568_03881 | Not Available | Positive | 3784866 - 3785768 | 32346.9 |
| insertion sequence 2 orfa protein | SAMEA3710568_03882 | Not Available | Positive | 3786138 - 3786323 | 6659.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





