Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein yqae | SAMEA3710568_03863 | Not Available | Positive | 3767060 - 3767218 | 5865.57 |
| lysm domain/bon superfamily protein | SAMEA3710568_03864 | Not Available | Positive | 3767302 - 3767751 | 16036.9 |
| dna-binding transcriptional regulator csir | SAMEA3710568_03865 | Not Available | Negative | 3767752 - 3768414 | 24990.3 |
| gamma-aminobutyrate transporter | SAMEA3710568_03866 | Not Available | Negative | 3768435 - 3769835 | 51123.1 |
| 4-aminobutyrate aminotransferase | SAMEA3710568_03867 | Not Available | Negative | 3770073 - 3771200 | 40056.6 |
| succinate-semialdehyde dehydrogenase i | SAMEA3710568_03868 | Not Available | Negative | 3771367 - 3772092 | 25945.0 |
| succinate-semialdehyde dehydrogenase i | SAMEA3710568_03869 | Not Available | Negative | 3772114 - 3772815 | 24938.1 |
| hydroxyglutarate oxidase | SAMEA3710568_03870 | Not Available | Negative | 3772838 - 3774106 | 46082.8 |
| carbon starvation induced protein | SAMEA3710568_03871 | Not Available | Negative | 3774126 - 3775058 | 35726.6 |
| alpha amylase | SAMEA3710568_03872 | Not Available | Negative | 3775394 - 3777646 | 85104.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





