Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-keto-l-gulonate-6-phosphate decarboxylase | SAMEA3710568_03853 | Not Available | Negative | 3759407 - 3760057 | 23650.4 |
| pts system l-ascorbate-specific transporter subunit iia | SAMEA3710568_03854 | Not Available | Negative | 3760071 - 3760535 | 17207.4 |
| pts system l-ascorbate-specific transporter subunit iib | SAMEA3710568_03855 | Not Available | Negative | 3760545 - 3760850 | 10838.2 |
| ascorbate-specific permease iic component ulaa | SAMEA3710568_03856 | Not Available | Negative | 3760866 - 3762263 | 50695.6 |
| l-ascorbate 6-phosphate lactonase | SAMEA3710568_03857 | Not Available | Positive | 3762618 - 3763682 | 40044.7 |
| transcriptional repressor ular | SAMEA3710568_03858 | Not Available | Positive | 3763790 - 3764545 | 27545.6 |
| esterase | SAMEA3710568_03859 | Not Available | Negative | 3764542 - 3765291 | 27604.0 |
| biofilm stress and motility protein a | SAMEA3710568_03860 | Not Available | Positive | 3765473 - 3765802 | 12066.7 |
| protein ycfr | SAMEA3710568_03861 | Not Available | Positive | 3765951 - 3766226 | 9949.64 |
| isovaleryl coa dehydrogenase | SAMEA3710568_03862 | Not Available | Negative | 3766343 - 3766678 | 12538.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





