Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase | SAMEA3710568_03843 | Not Available | Negative | 3753103 - 3754008 | 33229.7 |
| integrase core domain | SAMEA3710568_03844 | Not Available | Negative | 3754130 - 3754834 | 27896.9 |
| protein of uncharacterised function (duf2686) | SAMEA3710568_03845 | Not Available | Positive | 3755059 - 3755616 | 20646.2 |
| 50s ribosomal protein l9 | SAMEA3710568_03846 | Not Available | Negative | 3755687 - 3756136 | 15770.0 |
| 30s ribosomal protein s18 | SAMEA3710568_03847 | Not Available | Negative | 3756178 - 3756405 | 8986.94 |
| primosomal replication protein n | SAMEA3710568_03848 | Not Available | Negative | 3756410 - 3756724 | 11472.9 |
| 30s ribosomal protein s6 | SAMEA3710568_03849 | Not Available | Negative | 3756731 - 3757126 | 15187.9 |
| membrane protein | SAMEA3710568_03850 | Not Available | Positive | 3757453 - 3757728 | 10149.9 |
| l-ribulose-5-phosphate 4-epimerase | SAMEA3710568_03851 | Not Available | Negative | 3757857 - 3758543 | 25355.2 |
| l-xylulose 5-phosphate 3-epimerase | SAMEA3710568_03852 | Not Available | Negative | 3758543 - 3759397 | 32052.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





