Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trimethoprim resistance protein,type i dihydrofolate reductase | SAMEA3710568_03833 | Not Available | Positive | 3745014 - 3745487 | 17560.2 |
| streptomycin adenyltransferase | SAMEA3710568_03834 | Not Available | Positive | 3745618 - 3746406 | 29043.8 |
| multidrug efflux protein | SAMEA3710568_03835 | Not Available | Positive | 3746612 - 3746959 | 12332.6 |
| dihydropteroate synthase | SAMEA3710568_03836 | Not Available | Positive | 3746953 - 3747792 | 30128.0 |
| uncharacterised protein | SAMEA3710568_03837 | Not Available | Positive | 3747920 - 3748123 | 7334.63 |
| chromate transporter, chromate ion transporter (chr) family | SAMEA3710568_03838 | Not Available | Positive | 3748279 - 3749484 | 42278.4 |
| lineage-specific thermal regulator protein | SAMEA3710568_03839 | Not Available | Positive | 3749495 - 3749800 | 11477.8 |
| integrase core domain | SAMEA3710568_03840 | Not Available | Positive | 3750027 - 3750791 | 29684.0 |
| uncharacterised protein | SAMEA3710568_03841 | Not Available | Negative | 3751284 - 3751868 | 21629.4 |
| probable multidrug-efflux transporter rv1258c/mt1297 | SAMEA3710568_03842 | Not Available | Negative | 3751868 - 3753106 | 40959.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





