Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adhesin | SAMEA3710568_03823 | Not Available | Positive | 3732507 - 3734438 | 68267.5 |
| 3-demethylubiquinone-9 3-methyltransferase | SAMEA3710568_03824 | Not Available | Negative | 3734566 - 3735288 | 26572.9 |
| dna gyrase subunit a | SAMEA3710568_03825 | Not Available | Positive | 3735435 - 3738062 | 96969.3 |
| pufy' protein | SAMEA3710568_03826 | Not Available | Positive | 3738211 - 3738717 | 18767.5 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_03827 | Not Available | Positive | 3738829 - 3739899 | 39480.1 |
| protein of uncharacterised function (duf1175) | SAMEA3710568_03828 | Not Available | Positive | 3739896 - 3740519 | 23853.6 |
| large extracellular alpha-helical protein | SAMEA3710568_03829 | Not Available | Positive | 3740663 - 3742795 | 78970.7 |
| uncharacterised protein | SAMEA3710568_03830 | Not Available | Positive | 3742960 - 3743091 | 4887.09 |
| urf2 protein | SAMEA3710568_03831 | Not Available | Negative | 3743290 - 3743490 | 7066.12 |
| integrase/recombinase | SAMEA3710568_03832 | Not Available | Negative | 3743843 - 3744856 | 38383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





