Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative methyltransferase | SAMEA3710568_03697 | Not Available | Negative | 3608927 - 3609649 | 27226.7 |
| hydroxyacylglutathione hydrolase | SAMEA3710568_03698 | Not Available | Positive | 3609683 - 3610438 | 28514.0 |
| membrane-bound lytic murein transglycosylase d | SAMEA3710568_03699 | Not Available | Positive | 3610648 - 3611856 | 44435.3 |
| methyltransferase, ubie/coq5 family | SAMEA3710568_03700 | Not Available | Negative | 3611904 - 3612674 | 28327.6 |
| protein yafd | SAMEA3710568_03701 | Not Available | Negative | 3612752 - 3613531 | 29128.3 |
| lysr family transcriptional regulator | SAMEA3710568_03702 | Not Available | Positive | 3613793 - 3614707 | 33711.8 |
| putative mannitol-1-phosphate/altronate dehydrogenase | SAMEA3710568_03703 | Not Available | Negative | 3615134 - 3616585 | 54811.3 |
| diguanylate cyclase (ggdef) domain protein | SAMEA3710568_03704 | Not Available | Negative | 3616812 - 3618230 | 52300.7 |
| uncharacterised protein | SAMEA3710568_03705 | Not Available | Negative | 3618384 - 3618728 | 12945.8 |
| glutaminase | SAMEA3710568_03706 | Not Available | Negative | 3618728 - 3619654 | 33547.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





