Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein f | SAMEA3710568_03666 | Not Available | Positive | 3581458 - 3582546 | 39365.5 |
| aromatic amino acid aminotransferase | SAMEA3710568_03667 | Not Available | Positive | 3582731 - 3583921 | 43592.8 |
| metallo-beta-lactamase family protein | SAMEA3710568_03668 | Not Available | Negative | 3584144 - 3584791 | 23773.4 |
| putative exported protein, tat-dependent | SAMEA3710568_03669 | Not Available | Negative | 3584818 - 3585366 | 20355.6 |
| putative amidase | SAMEA3710568_03670 | Not Available | Negative | 3585547 - 3587394 | 67959.4 |
| is4 orf | SAMEA3710568_03671 | Not Available | Negative | 3587602 - 3587862 | 9820.37 |
| 2-keto-3-deoxygluconate permease | SAMEA3710568_03672 | Not Available | Negative | 3588067 - 3589050 | 33671.4 |
| superoxide dismutase | SAMEA3710568_03673 | Not Available | Negative | 3589310 - 3589930 | 23080.2 |
| rhamnose-proton symporter | SAMEA3710568_03674 | Not Available | Positive | 3590215 - 3591048 | 29988.9 |
| rhamnose-proton symporter | SAMEA3710568_03675 | Not Available | Positive | 3591100 - 3591249 | 5119.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





