Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative secretion protein | SAMEA3710568_03605 | Not Available | Negative | 3528601 - 3528996 | 14122.0 |
| is1 orfb | SAMEA3710568_03606 | Not Available | Positive | 3529322 - 3529615 | 11467.1 |
| inner membrane protein yiaw | SAMEA3710568_03607 | Not Available | Negative | 3529626 - 3529766 | 5326.74 |
| membrane protein | SAMEA3710568_03608 | Not Available | Positive | 3529880 - 3530092 | 8007.14 |
| aldehyde dehydrogenase b | SAMEA3710568_03609 | Not Available | Negative | 3530311 - 3531849 | 56339.5 |
| putative alcohol dehydrogenase | SAMEA3710568_03610 | Not Available | Negative | 3532014 - 3533165 | 40398.7 |
| selenocysteinyl-trna-specific translation factor | SAMEA3710568_03611 | Not Available | Negative | 3533355 - 3535199 | 68866.5 |
| selenocysteine synthase | SAMEA3710568_03612 | Not Available | Negative | 3535196 - 3536587 | 50638.3 |
| putative glutathione s-transferase | SAMEA3710568_03613 | Not Available | Negative | 3536685 - 3537293 | 22606.4 |
| auxiliary transport protein, membrane fusion protein family | SAMEA3710568_03614 | Not Available | Negative | 3537364 - 3538449 | 39919.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





