Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide abc transporter permease lptf | SAMEA3710568_03583 | Not Available | Positive | 3507603 - 3508703 | 40360.1 |
| inner membrane protein yjgq | SAMEA3710568_03584 | Not Available | Positive | 3508703 - 3509785 | 39592.0 |
| ornithine/acetylornithine aminotransferase | SAMEA3710568_03585 | Not Available | Negative | 3509904 - 3511406 | 54419.6 |
| oxidoreductase | SAMEA3710568_03586 | Not Available | Negative | 3511535 - 3512554 | 36506.0 |
| Trna-leu | Not Available | Not Available | Positive | 3512750 - 3512834 | Not Available |
| putative p4-type integrase | SAMEA3710568_03588 | Not Available | Positive | 3513033 - 3514244 | 45665.1 |
| putative hemolysin | SAMEA3710568_03589 | Not Available | Negative | 3514622 - 3514888 | 8726.46 |
| pyruvate-flavodoxin oxidoreductase | SAMEA3710568_03590 | Not Available | Positive | 3515162 - 3518686 | 128909.0 |
| putative outer membrane protein 1b | SAMEA3710568_03592 | Not Available | Positive | 3519053 - 3519949 | 32639.2 |
| outer membrane protein n | SAMEA3710568_03593 | Not Available | Positive | 3519949 - 3520182 | 8408.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





