Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| involved in lipopolysaccharide biosynthesis | SAMEA3710568_03573 | Not Available | Positive | 3495011 - 3495883 | 34037.6 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMEA3710568_03574 | Not Available | Positive | 3496158 - 3497354 | 43119.5 |
| l-threonine 3-dehydrogenase | SAMEA3710568_03575 | Not Available | Positive | 3497364 - 3498389 | 37247.2 |
| ornithine carbamoyltransferase | SAMEA3710568_03576 | Not Available | Negative | 3498810 - 3499823 | 37206.5 |
| rnase e inhibitor protein | SAMEA3710568_03577 | Not Available | Positive | 3499985 - 3500401 | 15603.5 |
| putative acetyltransferase yjgm | SAMEA3710568_03578 | Not Available | Negative | 3500447 - 3500950 | 18599.5 |
| inner membrane protein yjgn | SAMEA3710568_03579 | Not Available | Positive | 3501143 - 3502339 | 44830.0 |
| valyl-trna synthetase | SAMEA3710568_03580 | Not Available | Negative | 3502393 - 3505248 | 108183.0 |
| dna polymerase iii subunit chi | SAMEA3710568_03581 | Not Available | Negative | 3505248 - 3505730 | 18165.4 |
| leucyl aminopeptidase | SAMEA3710568_03582 | Not Available | Negative | 3505825 - 3507336 | 54928.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





