Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide core biosynthesis protein rfag | SAMEA3710568_03563 | Not Available | Positive | 3484611 - 3485735 | 42488.6 |
| lps biosynthesis enzyme | SAMEA3710568_03564 | Not Available | Positive | 3485728 - 3486525 | 30953.9 |
| udp-d-galactose:(glucosyl)lipopolysaccharide- alpha-1, 3-d- galactosyltransferase | SAMEA3710568_03565 | Not Available | Positive | 3486568 - 3487575 | 39431.8 |
| lipopolysaccharide core biosynthesis protein | SAMEA3710568_03566 | Not Available | Positive | 3487601 - 3488308 | 27509.7 |
| lipopolysaccharide 1,2-glucosyltransferase | SAMEA3710568_03567 | Not Available | Positive | 3488333 - 3489346 | 40059.9 |
| lipopolysaccharide 1,2-n-acetylglucosaminetransferase | SAMEA3710568_03568 | Not Available | Positive | 3489355 - 3490497 | 43593.0 |
| lipid a-core, surface polymer ligase | SAMEA3710568_03569 | Not Available | Negative | 3490533 - 3491741 | 46089.7 |
| putative adp-heptose:lps heptosyltransferase | SAMEA3710568_03570 | Not Available | Negative | 3491738 - 3492730 | 36712.0 |
| adp-heptose--lps heptosyltransferase | SAMEA3710568_03571 | Not Available | Negative | 3492734 - 3493780 | 39030.4 |
| adp-l-glycero-d-manno-heptose-6-epimerase | SAMEA3710568_03572 | Not Available | Negative | 3493790 - 3494722 | 34896.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





