Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative aldolase yiht | SAMEA3710568_03552 | Not Available | Positive | 3474146 - 3474532 | 13688.8 |
| putative aldolase yiht | SAMEA3710568_03553 | Not Available | Positive | 3474566 - 3475024 | 16843.5 |
| putative sugar isomerase yihs | SAMEA3710568_03554 | Not Available | Positive | 3475041 - 3476282 | 47431.1 |
| putative aldose-1-epimerase | SAMEA3710568_03555 | Not Available | Positive | 3476396 - 3477322 | 34063.9 |
| alpha-glucosidase yihq | SAMEA3710568_03556 | Not Available | Positive | 3477521 - 3479557 | 77308.9 |
| permease | SAMEA3710568_03557 | Not Available | Positive | 3479603 - 3480823 | 44855.7 |
| permease | SAMEA3710568_03558 | Not Available | Positive | 3481020 - 3482423 | 51514.1 |
| oligogalacturonate-specific porin protein kdgm | SAMEA3710568_03559 | Not Available | Positive | 3482491 - 3482901 | 15209.2 |
| is1 orfb | SAMEA3710568_03560 | Not Available | Positive | 3482989 - 3483198 | 8348.24 |
| lipopolysaccharide core biosynthesis protein | SAMEA3710568_03562 | Not Available | Positive | 3483556 - 3484614 | 39448.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





