Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-enterobactin transporter atp-binding protein | SAMEA3710568_03520 | Not Available | Positive | 3448311 - 3449126 | 29816.0 |
| ferric enterobactin transport protein fepe | SAMEA3710568_03521 | Not Available | Negative | 3449123 - 3449803 | 24957.0 |
| ferric enterobactin transport protein fepe | SAMEA3710568_03522 | Not Available | Negative | 3449867 - 3450256 | 14530.6 |
| putative alpha-mannosidase | SAMEA3710568_03523 | Not Available | Negative | 3450667 - 3450819 | 6046.54 |
| citrate lyase synthetase | SAMEA3710568_03524 | Not Available | Positive | 3451199 - 3452257 | 40069.5 |
| citrate lyase subunit gamma | SAMEA3710568_03525 | Not Available | Positive | 3452272 - 3452568 | 10670.9 |
| citrate lyase subunit beta | SAMEA3710568_03526 | Not Available | Positive | 3452565 - 3453473 | 33092.6 |
| citrate lyase alpha chain | SAMEA3710568_03527 | Not Available | Positive | 3453484 - 3455016 | 55308.2 |
| putative apo-citrate lyase phosphoribosyl-dephospho-coa transferase | SAMEA3710568_03528 | Not Available | Positive | 3455020 - 3455508 | 17884.6 |
| triphosphoribosyl-dephospho-coa synthase | SAMEA3710568_03529 | Not Available | Positive | 3455545 - 3456423 | 31609.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





