Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adhesin | SAMEA3710568_03480 | Not Available | Negative | 3412837 - 3413985 | 37762.1 |
| lipoprotein | SAMEA3710568_03481 | Not Available | Negative | 3414029 - 3414712 | 25395.7 |
| dna-binding transcriptional regulator chbr | SAMEA3710568_03482 | Not Available | Negative | 3415585 - 3416097 | 20075.9 |
| n,n'-diacetylchitobiose-specific pts system transporter subunit iia | SAMEA3710568_03483 | Not Available | Negative | 3416108 - 3416458 | 12748.6 |
| pep-dependent phosphotransferase enzyme ii for cellobiose, arbutin, and salicin | SAMEA3710568_03484 | Not Available | Negative | 3416517 - 3417578 | 37743.8 |
| pts system n,n'-diacetylchitobiose-specific transporter subunit iic | SAMEA3710568_03485 | Not Available | Negative | 3417674 - 3417865 | 6862.73 |
| pts system n,n'-diacetylchitobiose-specific transporter subunit iib | SAMEA3710568_03486 | Not Available | Negative | 3417950 - 3418270 | 11439.3 |
| dna-binding transcriptional activator osme | SAMEA3710568_03487 | Not Available | Negative | 3418569 - 3418907 | 12021.3 |
| nad synthetase | SAMEA3710568_03488 | Not Available | Positive | 3419109 - 3419936 | 30796.7 |
| nucleotide excision repair endonuclease | SAMEA3710568_03489 | Not Available | Positive | 3420166 - 3421053 | 33707.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





