Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese domain-containing protein | SAMEA3710568_03470 | Not Available | Positive | 3401341 - 3401772 | 15587.2 |
| glutaredoxin 3 | SAMEA3710568_03471 | Not Available | Positive | 3401914 - 3402165 | 9084.95 |
| preprotein translocase subunit secb | SAMEA3710568_03472 | Not Available | Positive | 3402228 - 3402695 | 17278.3 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | SAMEA3710568_03473 | Not Available | Positive | 3402695 - 3403714 | 36363.8 |
| serine acetyltransferase | SAMEA3710568_03474 | Not Available | Positive | 3403794 - 3404615 | 29318.4 |
| putative trna/rrna methyltransferase yibk | SAMEA3710568_03475 | Not Available | Negative | 3404668 - 3405141 | 17741.3 |
| l-lactate dehydrogenase | SAMEA3710568_03476 | Not Available | Negative | 3405337 - 3406527 | 42760.7 |
| putative l-lactate dehydrogenase operon regulatory protein | SAMEA3710568_03477 | Not Available | Negative | 3406524 - 3407300 | 29167.9 |
| l-lactate permease | SAMEA3710568_03478 | Not Available | Negative | 3407300 - 3408955 | 59188.5 |
| adhesin | SAMEA3710568_03479 | Not Available | Negative | 3409323 - 3412379 | 103356.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





