Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nickel/cobalt efflux system rcna | SAMEA3710568_03460 | Not Available | Positive | 3390401 - 3390874 | 17470.1 |
| nickel/cobalt homeostasis protein rcnb precursor | SAMEA3710568_03461 | Not Available | Positive | 3391093 - 3391431 | 12494.9 |
| putative type-1 fimbrial protein | SAMEA3710568_03462 | Not Available | Negative | 3391731 - 3392546 | 29194.9 |
| outer membrane protein | SAMEA3710568_03463 | Not Available | Negative | 3392562 - 3395042 | 92413.1 |
| chaperone | SAMEA3710568_03464 | Not Available | Negative | 3395058 - 3395732 | 24925.5 |
| fimbrial-like protein | SAMEA3710568_03465 | Not Available | Negative | 3395813 - 3396337 | 18302.7 |
| is1 orf2 | SAMEA3710568_03466 | Not Available | Negative | 3396613 - 3396906 | 11525.2 |
| polysaccharide deacetylase family protein | SAMEA3710568_03467 | Not Available | Negative | 3397296 - 3398255 | 35370.8 |
| amib activator | SAMEA3710568_03468 | Not Available | Negative | 3398259 - 3399518 | 46622.4 |
| putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | SAMEA3710568_03469 | Not Available | Negative | 3399552 - 3401096 | 56104.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





