Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ipah7.8 | SAMEA3710568_03396 | Not Available | Negative | 3327517 - 3327996 | 17791.9 |
| putative outer membrane porin protein | SAMEA3710568_03397 | Not Available | Negative | 3328166 - 3329266 | 41035.4 |
| aromatic amino acid exporter | SAMEA3710568_03398 | Not Available | Negative | 3329521 - 3330345 | 29582.8 |
| formate dehydrogenase, nitrate-inducible, iron-sulfur subunit | SAMEA3710568_03400 | Not Available | Positive | 3333694 - 3334578 | 32240.4 |
| formate dehydrogenase-n subunit gamma | SAMEA3710568_03401 | Not Available | Positive | 3334571 - 3335224 | 25370.0 |
| plasmid maintenance system antidote protein, xre family | SAMEA3710568_03402 | Not Available | Negative | 3335452 - 3335736 | 10385.8 |
| alcohol dehydrogenase | SAMEA3710568_03403 | Not Available | Negative | 3335882 - 3336892 | 35524.7 |
| malate dehydrogenase | SAMEA3710568_03404 | Not Available | Negative | 3337026 - 3338723 | 63167.0 |
| uncharacterised protein | SAMEA3710568_03405 | Not Available | Negative | 3339425 - 3339670 | 9220.99 |
| uncharacterised protein | SAMEA3710568_03406 | Not Available | Negative | 3340447 - 3341289 | 32680.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





