Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major outer membrane lipoprotein | SAMEA3710568_03386 | Not Available | Negative | 3315858 - 3316094 | 8323.95 |
| pyruvate kinase i | SAMEA3710568_03387 | Not Available | Negative | 3316405 - 3317817 | 50732.6 |
| putative is91 orf2 | SAMEA3710568_03388 | Not Available | Negative | 3318670 - 3318801 | 5163.11 |
| nitrate reductase 1, beta subunit | SAMEA3710568_03389 | Not Available | Negative | 3318836 - 3319768 | 35632.7 |
| cryptic nitrate reductase 2 subunit alpha | SAMEA3710568_03390 | Not Available | Negative | 3319765 - 3322818 | 113646.0 |
| cryptic nitrate reductase 2 subunit alpha | SAMEA3710568_03391 | Not Available | Negative | 3322861 - 3323505 | 24833.6 |
| nitrite extrusion protein 2 | SAMEA3710568_03392 | Not Available | Negative | 3323587 - 3324975 | 49938.1 |
| is1 orfb | SAMEA3710568_03393 | Not Available | Negative | 3325433 - 3325726 | 11481.1 |
| leucine-rich repeat protein | SAMEA3710568_03394 | Not Available | Negative | 3326181 - 3326411 | 8630.45 |
| glycoprotein | SAMEA3710568_03395 | Not Available | Negative | 3326418 - 3327371 | 36018.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





