Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase, fad-binding | SAMEA3710568_03375 | Not Available | Positive | 3304831 - 3307887 | 113254.0 |
| esterase ydii | SAMEA3710568_03376 | Not Available | Positive | 3307884 - 3308294 | 14960.2 |
| uncharacterised protein | SAMEA3710568_03377 | Not Available | Positive | 3308394 - 3308582 | 7266.74 |
| iron-sulfur cluster assembly scaffold protein | SAMEA3710568_03379 | Not Available | Positive | 3309130 - 3309498 | 13416.0 |
| cysteine desulfurase activator complex subunit sufb | SAMEA3710568_03380 | Not Available | Positive | 3309507 - 3310994 | 54748.1 |
| cysteine desulfurase atpase | SAMEA3710568_03381 | Not Available | Positive | 3311004 - 3311750 | 27603.0 |
| cysteine desulfurase activator complex subunit sufd | SAMEA3710568_03382 | Not Available | Positive | 3311725 - 3312996 | 46785.4 |
| bifunctional cysteine desulfurase/selenocysteine lyase | SAMEA3710568_03383 | Not Available | Positive | 3312993 - 3314213 | 44442.4 |
| cysteine desufuration protein sufe | SAMEA3710568_03384 | Not Available | Positive | 3314226 - 3314642 | 15658.1 |
| lysm domain/erfk/ybis/ycfs/ynhg family protein | SAMEA3710568_03385 | Not Available | Positive | 3314791 - 3315795 | 36056.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





