Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s1 | SAMEA3710568_03334 | Not Available | Positive | 3257886 - 3259559 | 61161.5 |
| integration host factor subunit beta | SAMEA3710568_03335 | Not Available | Positive | 3259719 - 3260003 | 10651.8 |
| comec family competence protein | SAMEA3710568_03336 | Not Available | Positive | 3260210 - 3260563 | 12819.2 |
| comec family competence protein | SAMEA3710568_03337 | Not Available | Positive | 3260600 - 3261796 | 44414.6 |
| dna internalization-related competence protein comec/rec2-like protein | SAMEA3710568_03338 | Not Available | Positive | 3261777 - 3262469 | 26566.2 |
| lipid transporter atp-binding protein/permease | SAMEA3710568_03339 | Not Available | Positive | 3262506 - 3264254 | 64491.7 |
| tetraacyldisaccharide 4'-kinase | SAMEA3710568_03340 | Not Available | Positive | 3264251 - 3265237 | 35565.3 |
| uncharacterized protein conserved in bacteria | SAMEA3710568_03341 | Not Available | Positive | 3265274 - 3266506 | 47670.6 |
| protein ycar | SAMEA3710568_03342 | Not Available | Positive | 3266558 - 3266740 | 6855.35 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | SAMEA3710568_03343 | Not Available | Positive | 3266737 - 3267483 | 27576.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





