Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transient receptor potential locus | SAMEA3710568_03304 | Not Available | Negative | 3229647 - 3229970 | 12143.6 |
| putative zinc-type alcohol dehydrogenase-like protein ycjq | SAMEA3710568_03305 | Not Available | Negative | 3229988 - 3231040 | 38218.6 |
| putative transport system permease | SAMEA3710568_03306 | Not Available | Negative | 3231071 - 3231913 | 31326.3 |
| inner membrane abc transporter permease protein ycjo | SAMEA3710568_03307 | Not Available | Negative | 3231900 - 3232781 | 33227.3 |
| transport periplasmic protein | SAMEA3710568_03308 | Not Available | Negative | 3232802 - 3233407 | 21562.0 |
| transport periplasmic protein | SAMEA3710568_03309 | Not Available | Negative | 3233456 - 3234085 | 23011.6 |
| putative glycosidase | SAMEA3710568_03310 | Not Available | Negative | 3234099 - 3234617 | 19829.6 |
| ydha protein | SAMEA3710568_03311 | Not Available | Positive | 3234981 - 3235229 | 9554.24 |
| pyridoxamine 5'-phosphate oxidase | SAMEA3710568_03312 | Not Available | Positive | 3235288 - 3235944 | 25546.6 |
| tyrosyl-trna synthetase | SAMEA3710568_03313 | Not Available | Positive | 3236073 - 3237347 | 47587.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





