Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Shigella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Shigella |
| Species | Shigella flexneri |
| Strain | strain 4028STDY6275090 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Primates, Pteropodidae |
| Cell arrangement | Pairs-Singles |
| Sporulation | Nonsporulating |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1157740 bp
Thymine Count
1161476 bp
Guanine Count
1177919 bp
Cytosine Count
1185036 bp
Genome Length
4682558 bp
Protein-coding Genes
4540 genes
Non-Coding Genes
179 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein ycjf | SAMEA3710568_03294 | Not Available | Negative | 3219451 - 3220512 | 39450.6 |
| protein ycjx | SAMEA3710568_03295 | Not Available | Negative | 3220509 - 3221906 | 52798.9 |
| laci family transcriptional regulator | SAMEA3710568_03296 | Not Available | Positive | 3222062 - 3223060 | 36151.2 |
| monomeric porin ompg | SAMEA3710568_03297 | Not Available | Negative | 3223363 - 3224043 | 25959.9 |
| putative abc transporter atp-binding protein ycjv | SAMEA3710568_03298 | Not Available | Negative | 3224229 - 3225197 | 35738.8 |
| putative beta-phosphoglucomutase | SAMEA3710568_03299 | Not Available | Negative | 3225211 - 3225870 | 23603.4 |
| putative trehalose and maltose hydrolase | SAMEA3710568_03300 | Not Available | Negative | 3225867 - 3228134 | 84876.2 |
| dehydrogenase | SAMEA3710568_03301 | Not Available | Negative | 3228131 - 3228754 | 22766.4 |
| dehydrogenase | SAMEA3710568_03302 | Not Available | Negative | 3228751 - 3229185 | 15936.2 |
| transient receptor potential locus | SAMEA3710568_03303 | Not Available | Negative | 3229195 - 3229650 | 17453.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Shigellosis | Causes | PMC2600399 |
| Shigellosis | Causes | PMC5109407 |
| Shigellosis | Causes | PMC5177732 |
| Severe diarrhea | Causes | PMC8742002 |
| Dysenteric disease | Causes | PMC8742002 |
| Shigellosis | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC8742002 |
| Pandemic dysentery | Causes | PMC8742002 |
| Bacillary dysentery | Causes | PMC4159516 |
| Shigellosis | Causes | PMC5429569 |





